Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 95 catalytic domain-containing protein | BVU_RS03820 | Not Available | Negative | 1051652 - 1054054 | 88977.2 |
| gh92 family glycosyl hydrolase | BVU_RS03825 | Not Available | Negative | 1054174 - 1056456 | 86555.5 |
| gh92 family glycosyl hydrolase | BVU_RS03830 | Not Available | Negative | 1056491 - 1058707 | 83871.2 |
| aaa domain-containing protein | BVU_RS03835 | Not Available | Positive | 1058992 - 1062459 | 133248.0 |
| duf418 domain-containing protein | BVU_RS03840 | Not Available | Negative | 1062608 - 1063789 | 45342.9 |
| helix-turn-helix transcriptional regulator | BVU_RS22980 | Not Available | Negative | 1063800 - 1063970 | 6785.33 |
| atp-binding protein | BVU_RS03845 | Not Available | Negative | 1064114 - 1065385 | 49393.9 |
| iron-containing alcohol dehydrogenase | BVU_RS03850 | Not Available | Positive | 1065609 - 1066781 | 42965.0 |
| creatininase family protein | BVU_RS03855 | Not Available | Positive | 1066781 - 1067536 | 28416.0 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS03860 | Not Available | Positive | 1068185 - 1071526 | 123127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

