Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence element accessory protein tnpb | BVU_RS00190 | Not Available | Negative | 51403 - 51912 | 19798.7 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS00195 | Not Available | Negative | 52180 - 54114 | 71613.1 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS00200 | Not Available | Negative | 54129 - 57200 | 113114.0 |
| glycoside hydrolase family 43 protein | BVU_RS00205 | Not Available | Negative | 57242 - 58978 | 64662.4 |
| glycoside hydrolase family 43 protein | BVU_RS00210 | Not Available | Negative | 59328 - 60299 | 36792.0 |
| endo-1,4-beta-xylanase | BVU_RS00215 | Not Available | Negative | 60312 - 61433 | 42056.4 |
| is110 family transposase | BVU_RS00220 | Not Available | Positive | 61646 - 62611 | 35654.6 |
| mfs transporter | BVU_RS00225 | Not Available | Negative | 62782 - 64275 | 54449.7 |
| glycoside hydrolase family 16 protein | BVU_RS00230 | Not Available | Negative | 64603 - 65394 | 30544.4 |
| is982 family transposase | BVU_RS00235 | Not Available | Positive | 65510 - 66415 | 35030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

