Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose epimerase family protein | BVU_RS03775 | Not Available | Negative | 1029657 - 1030679 | 38701.6 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS03780 | Not Available | Negative | 1030769 - 1032388 | 61970.6 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS03785 | Not Available | Negative | 1032434 - 1035487 | 113319.0 |
| alpha-galactosidase | BVU_RS03790 | Not Available | Negative | 1035527 - 1037554 | 76293.4 |
| hybrid sensor histidine kinase/response regulator transcription factor | BVU_RS03795 | Not Available | Negative | 1037758 - 1041795 | 154557.0 |
| glycoside hydrolase family 97 c-terminal domain-containing protein | BVU_RS22660 | Not Available | Negative | 1041879 - 1042283 | 15384.6 |
| glycoside hydrolase family 97 catalytic domain-containing protein | BVU_RS03800 | Not Available | Negative | 1042287 - 1043864 | 59960.6 |
| duf5107 domain-containing protein | BVU_RS03805 | Not Available | Negative | 1043861 - 1047202 | 128496.0 |
| sugar porter family mfs transporter | BVU_RS03810 | Not Available | Negative | 1047215 - 1048609 | 50741.4 |
| gh92 family glycosyl hydrolase | BVU_RS03815 | Not Available | Negative | 1048819 - 1051581 | 103055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

