Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BVU_RS03725 | Not Available | Negative | 1007986 - 1011282 | 122238.0 |
| fecr family protein | BVU_RS03730 | Not Available | Negative | 1011439 - 1012437 | 38257.9 |
| rna polymerase sigma-70 factor | BVU_RS03735 | Not Available | Negative | 1012498 - 1013088 | 23553.4 |
| alpha-galactosidase | BVU_RS03740 | Not Available | Negative | 1013984 - 1016140 | 82570.4 |
| arac family transcriptional regulator | BVU_RS03745 | Not Available | Positive | 1016328 - 1017224 | 34794.4 |
| sialate o-acetylesterase | BVU_RS03750 | Not Available | Negative | 1017237 - 1019174 | 71976.9 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS03755 | Not Available | Negative | 1019207 - 1021153 | 75196.5 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS03760 | Not Available | Negative | 1021182 - 1024319 | 117341.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | BVU_RS03765 | Not Available | Negative | 1024400 - 1026643 | 82982.5 |
| discoidin domain-containing protein | BVU_RS03770 | Not Available | Negative | 1026685 - 1029627 | 111327.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

