Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | BVU_RS02800 | Not Available | Positive | 780519 - 780917 | 15066.1 |
| acetylornithine carbamoyltransferase | BVU_RS02805 | Not Available | Negative | 781306 - 782271 | 36461.8 |
| glutamate-5-semialdehyde dehydrogenase | BVU_RS02810 | Not Available | Negative | 782291 - 783544 | 45494.7 |
| glutamate 5-kinase | BVU_RS02815 | Not Available | Negative | 783582 - 784664 | 39536.0 |
| cof-type had-iib family hydrolase | BVU_RS02820 | Not Available | Positive | 784823 - 785605 | 28795.5 |
| gh92 family glycosyl hydrolase | BVU_RS02825 | Not Available | Positive | 785809 - 788001 | 82062.1 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | BVU_RS02830 | Not Available | Negative | 788124 - 790433 | 83744.1 |
| helix-turn-helix transcriptional regulator | BVU_RS02835 | Not Available | Negative | 790487 - 791878 | 53319.5 |
| hypothetical protein | BVU_RS21020 | Not Available | Negative | 792092 - 792568 | 18232.3 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | BVU_RS02845 | Not Available | Negative | 792859 - 794799 | 72000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

