Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | BVU_RS02505 | Not Available | Positive | 677887 - 678228 | 12875.8 |
| glycoside hydrolase family 127 protein | BVU_RS02510 | Not Available | Negative | 678281 - 680632 | 88954.3 |
| glycoside hydrolase family 31 protein | BVU_RS02515 | Not Available | Negative | 680686 - 683145 | 95186.6 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS02520 | Not Available | Negative | 683215 - 684849 | 62640.4 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS02525 | Not Available | Negative | 684871 - 687819 | 108848.0 |
| helix-turn-helix domain-containing protein | BVU_RS02530 | Not Available | Negative | 688030 - 690870 | 108795.0 |
| beta-galactosidase | BVU_RS02535 | Not Available | Negative | 691058 - 693406 | 88314.6 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | BVU_RS02540 | Not Available | Negative | 693423 - 695921 | 92500.5 |
| family 43 glycosylhydrolase | BVU_RS02545 | Not Available | Negative | 695949 - 697892 | 73194.7 |
| glycoside hydrolase family 30 protein | BVU_RS02550 | Not Available | Negative | 698086 - 699594 | 57900.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

