Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4595 domain-containing protein | BVU_RS02255 | Not Available | Positive | 627213 - 628013 | 30327.9 |
| helix-turn-helix transcriptional regulator | BVU_RS02260 | Not Available | Negative | 628339 - 629754 | 54336.1 |
| hypothetical protein | BVU_RS22120 | Not Available | Negative | 630074 - 630295 | 8364.95 |
| dna helicase recq | BVU_RS02265 | Not Available | Negative | 630432 - 632612 | 81679.6 |
| atp-dependent clp protease atp-binding subunit clpx | BVU_RS02270 | Not Available | Negative | 632770 - 634020 | 46679.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | BVU_RS02275 | Not Available | Negative | 634144 - 634815 | 24864.8 |
| trigger factor | BVU_RS02280 | Not Available | Negative | 634996 - 636351 | 51542.8 |
| rna recognition motif domain-containing protein | BVU_RS02285 | Not Available | Positive | 636733 - 636978 | 9049.81 |
| lps export abc transporter atp-binding protein | BVU_RS02290 | Not Available | Negative | 637055 - 637876 | 31018.3 |
| mlae family abc transporter permease | BVU_RS02295 | Not Available | Positive | 638005 - 638748 | 27369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

