Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | BVU_RS20845 | Not Available | Positive | 5125281 - 5126624 | 51190.6 |
| tyrosine-type recombinase/integrase | BVU_RS20850 | Not Available | Negative | 5126655 - 5127458 | 31455.2 |
| restriction endonuclease subunit s | BVU_RS20855 | Not Available | Negative | 5127935 - 5129284 | 50795.4 |
| pddexk nuclease domain-containing protein | BVU_RS20860 | Not Available | Negative | 5129330 - 5130460 | 44015.8 |
| type i restriction-modification system subunit m | BVU_RS20865 | Not Available | Negative | 5130464 - 5131882 | 53122.5 |
| dead/deah box helicase family protein | BVU_RS20870 | Not Available | Negative | 5131887 - 5134589 | 102533.0 |
| helix-turn-helix domain-containing protein | BVU_RS20875 | Not Available | Negative | 5134680 - 5134889 | 8031.9 |
| giy-yig nuclease family protein | BVU_RS20880 | Not Available | Positive | 5135013 - 5135840 | 31201.8 |
| ydei/ompd-associated family protein | BVU_RS20885 | Not Available | Positive | 5135864 - 5136262 | 15404.5 |
| helix-turn-helix transcriptional regulator | BVU_RS22965 | Not Available | Negative | 5136301 - 5136669 | 14489.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

