Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | BVU_RS20795 | Not Available | Positive | 5110659 - 5111321 | 24957.5 |
| putative lps assembly protein lptd | BVU_RS20800 | Not Available | Negative | 5111399 - 5114134 | 103867.0 |
| hd domain-containing protein | BVU_RS20805 | Not Available | Negative | 5114225 - 5114761 | 20311.5 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | BVU_RS20810 | Not Available | Positive | 5114815 - 5115975 | 43609.9 |
| s26 family signal peptidase | BVU_RS20815 | Not Available | Negative | 5116003 - 5116470 | 18099.4 |
| hypothetical protein | BVU_RS20820 | Not Available | Negative | 5116439 - 5117353 | 33739.3 |
| abc transporter atp-binding protein | BVU_RS20825 | Not Available | Negative | 5117337 - 5118989 | 61635.1 |
| nucleotidyltransferase family protein | BVU_RS20830 | Not Available | Negative | 5118997 - 5120112 | 42494.6 |
| pqqd family protein | BVU_RS20835 | Not Available | Negative | 5120120 - 5120389 | 10032.2 |
| fimbrillin family protein | BVU_RS20840 | Not Available | Negative | 5120502 - 5123333 | 98116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

