Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| age family epimerase/isomerase | BVU_RS20645 | Not Available | Positive | 5065148 - 5066344 | 46212.1 |
| mfs transporter | BVU_RS20650 | Not Available | Positive | 5066363 - 5067598 | 44685.5 |
| glucosamine-6-phosphate deaminase | BVU_RS20655 | Not Available | Positive | 5067644 - 5068435 | 29021.6 |
| glucosamine-6-phosphate deaminase | BVU_RS20660 | Not Available | Positive | 5068439 - 5070427 | 74771.3 |
| tigr02757 family protein | BVU_RS20665 | Not Available | Negative | 5070603 - 5071367 | 29921.8 |
| helix-turn-helix domain-containing protein | BVU_RS20670 | Not Available | Negative | 5071433 - 5072311 | 34389.8 |
| efflux rnd transporter periplasmic adaptor subunit | BVU_RS20675 | Not Available | Positive | 5072488 - 5073555 | 39261.3 |
| efflux rnd transporter permease subunit | BVU_RS20680 | Not Available | Positive | 5073555 - 5076680 | 115862.0 |
| tolc family protein | BVU_RS20685 | Not Available | Positive | 5076713 - 5078092 | 51471.9 |
| hu family dna-binding protein | BVU_RS20690 | Not Available | Negative | 5078307 - 5078933 | 23816.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

