Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | BVU_RS20595 | Not Available | Positive | 5050569 - 5051564 | 37117.2 |
| glucose-6-phosphate isomerase | BVU_RS20600 | Not Available | Positive | 5051578 - 5052921 | 49050.8 |
| had family hydrolase | BVU_RS20605 | Not Available | Positive | 5053071 - 5053805 | 27124.5 |
| alpha/beta hydrolase family protein | BVU_RS20610 | Not Available | Negative | 5053918 - 5055162 | 47319.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS20615 | Not Available | Negative | 5055175 - 5056764 | 60813.9 |
| tonb-dependent receptor | BVU_RS20620 | Not Available | Negative | 5056780 - 5060517 | 139710.0 |
| fecr family protein | BVU_RS20625 | Not Available | Negative | 5060665 - 5061747 | 41095.2 |
| rna polymerase sigma factor | BVU_RS20630 | Not Available | Negative | 5061960 - 5062595 | 24920.2 |
| rok family transcriptional regulator | BVU_RS20635 | Not Available | Negative | 5062710 - 5063915 | 44586.1 |
| dihydrodipicolinate synthase family protein | BVU_RS20640 | Not Available | Positive | 5064221 - 5065135 | 33910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

