Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BVU_RS01845 | Not Available | Negative | 520389 - 521003 | 22216.8 |
| duf5060 domain-containing protein | BVU_RS01850 | Not Available | Negative | 521125 - 522729 | 61897.9 |
| hybrid sensor histidine kinase/response regulator transcription factor | BVU_RS01855 | Not Available | Negative | 522894 - 527216 | 165225.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS01860 | Not Available | Negative | 527392 - 529089 | 64613.3 |
| tonb-dependent receptor | BVU_RS01865 | Not Available | Negative | 529109 - 532378 | 122296.0 |
| fecr family protein | BVU_RS01870 | Not Available | Negative | 532407 - 533393 | 38338.8 |
| rna polymerase sigma factor | BVU_RS01875 | Not Available | Negative | 533458 - 534060 | 23598.8 |
| helix-turn-helix transcriptional regulator | BVU_RS01880 | Not Available | Negative | 534063 - 535316 | 48093.4 |
| is66-like element isbvu4 family transposase | BVU_RS01885 | Not Available | Negative | 535417 - 537030 | 61911.9 |
| is66 family insertion sequence element accessory protein tnpb | BVU_RS01890 | Not Available | Negative | 537099 - 537608 | 19798.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

