Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | BVU_RS20395 | Not Available | Negative | 5003362 - 5003859 | 17961.2 |
| ytxh domain-containing protein | BVU_RS20400 | Not Available | Positive | 5004070 - 5004267 | 6773.24 |
| phage holin family protein | BVU_RS20405 | Not Available | Positive | 5004345 - 5004701 | 13343.2 |
| hypothetical protein | BVU_RS20410 | Not Available | Positive | 5004704 - 5004970 | 10057.5 |
| s41 family peptidase | BVU_RS20415 | Not Available | Positive | 5005000 - 5008260 | 123008.0 |
| d-xylose transporter xyle | BVU_RS20420 | Not Available | Negative | 5009446 - 5010885 | 52826.7 |
| phosphoethanolamine transferase | BVU_RS20425 | Not Available | Negative | 5010936 - 5012642 | 64929.2 |
| bama/tama family outer membrane protein | BVU_RS20430 | Not Available | Negative | 5012629 - 5013816 | 45375.2 |
| tolc family protein | BVU_RS20435 | Not Available | Negative | 5013965 - 5015257 | 48388.8 |
| efflux rnd transporter permease subunit | BVU_RS20440 | Not Available | Negative | 5015257 - 5018304 | 112605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

