Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | BVU_RS20345 | Not Available | Negative | 4992421 - 4992618 | 7367.31 |
| translation initiation factor if-3 | BVU_RS20350 | Not Available | Negative | 4992690 - 4993286 | 22643.4 |
| threonine--trna ligase | BVU_RS20355 | Not Available | Negative | 4993402 - 4995342 | 74217.2 |
| tetratricopeptide repeat protein | BVU_RS20360 | Not Available | Negative | 4995423 - 4997432 | 77306.4 |
| peptide deformylase | BVU_RS20365 | Not Available | Negative | 4997505 - 4998059 | 21020.7 |
| holliday junction resolvase ruvx | BVU_RS20370 | Not Available | Negative | 4998083 - 4998502 | 15859.5 |
| hypothetical protein | BVU_RS20375 | Not Available | Positive | 4998709 - 4999947 | 47660.4 |
| duf3869 domain-containing protein | BVU_RS20380 | Not Available | Positive | 4999958 - 5000806 | 30479.6 |
| ompa family protein | BVU_RS20385 | Not Available | Positive | 5000850 - 5001944 | 39293.2 |
| pcmd domain-containing protein | BVU_RS20390 | Not Available | Negative | 5002277 - 5003236 | 35516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

