Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--fructose-6-phosphate transaminase (isomerizing) | BVU_RS20045 | Not Available | Negative | 4925272 - 4927116 | 67642.3 |
| glutamine synthetase iii | BVU_RS20050 | Not Available | Negative | 4927429 - 4929618 | 82007.6 |
| ammonium transporter | BVU_RS20055 | Not Available | Negative | 4929676 - 4931034 | 47593.4 |
| p-ii family nitrogen regulator | BVU_RS20060 | Not Available | Negative | 4931110 - 4931466 | 13455.3 |
| hypothetical protein | BVU_RS20065 | Not Available | Negative | 4931582 - 4932307 | 25603.7 |
| ll-diaminopimelate aminotransferase | BVU_RS20070 | Not Available | Negative | 4932424 - 4933653 | 45918.9 |
| diaminopimelate epimerase | BVU_RS20075 | Not Available | Negative | 4933700 - 4934542 | 30296.6 |
| glutamate synthase large subunit | BVU_RS20080 | Not Available | Positive | 4935066 - 4939544 | 164823.0 |
| glutamate synthase subunit beta | BVU_RS20085 | Not Available | Positive | 4939569 - 4940909 | 48726.7 |
| asparagine synthase b | BVU_RS20090 | Not Available | Positive | 4940926 - 4942596 | 62874.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

