Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster domain-containing protein | BVU_RS19505 | Not Available | Negative | 4795149 - 4796102 | 32597.8 |
| soxr reducing system rsec family protein | BVU_RS19510 | Not Available | Negative | 4796123 - 4796551 | 15752.6 |
| threonine ammonia-lyase | BVU_RS19515 | Not Available | Negative | 4796730 - 4797926 | 42410.4 |
| dmt family transporter | BVU_RS19520 | Not Available | Negative | 4798123 - 4799043 | 33682.5 |
| mfs transporter | BVU_RS19525 | Not Available | Negative | 4799080 - 4800270 | 43366.0 |
| glutamate decarboxylase | BVU_RS19530 | Not Available | Positive | 4800528 - 4801976 | 54644.7 |
| glutaminase a | BVU_RS19535 | Not Available | Positive | 4802042 - 4803004 | 34758.9 |
| copper homeostasis protein cutc | BVU_RS19540 | Not Available | Positive | 4803305 - 4804168 | 31413.6 |
| transposase | BVU_RS19545 | Not Available | Negative | 4804384 - 4805742 | 52906.8 |
| transglutaminase domain-containing protein | BVU_RS19550 | Not Available | Negative | 4805953 - 4808616 | 99150.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

