Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | BVU_RS01745 | Not Available | Negative | 499093 - 499677 | 22223.6 |
| mate family efflux transporter | BVU_RS01750 | Not Available | Negative | 499713 - 501065 | 49552.6 |
| Trna-thr | Not Available | Not Available | Positive | 501218 - 501291 | Not Available |
| chaperonin groel | BVU_RS01760 | Not Available | Negative | 501539 - 503176 | 58147.1 |
| co-chaperone groes | BVU_RS01765 | Not Available | Negative | 503218 - 503490 | 9740.92 |
| 4fe-4s dicluster domain-containing protein | BVU_RS01770 | Not Available | Positive | 503871 - 505337 | 54239.4 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | BVU_RS01775 | Not Available | Positive | 505346 - 506380 | 38858.7 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | BVU_RS01780 | Not Available | Positive | 506393 - 507811 | 53347.0 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | BVU_RS01785 | Not Available | Positive | 507875 - 509065 | 43900.6 |
| histidine--trna ligase | BVU_RS01790 | Not Available | Negative | 509645 - 511009 | 50329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

