Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | BVU_RS01690 | Not Available | Positive | 486915 - 488132 | 46297.2 |
| urocanate hydratase | BVU_RS01700 | Not Available | Positive | 488658 - 490655 | 74524.0 |
| glutamate formimidoyltransferase | BVU_RS01705 | Not Available | Positive | 490738 - 491640 | 33371.4 |
| gxxexxy protein | BVU_RS01710 | Not Available | Positive | 491658 - 492044 | 15150.3 |
| imidazolonepropionase | BVU_RS01715 | Not Available | Positive | 492091 - 493335 | 44947.3 |
| cyclodeaminase/cyclohydrolase family protein | BVU_RS01720 | Not Available | Positive | 493356 - 493979 | 22967.8 |
| histidine ammonia-lyase | BVU_RS01725 | Not Available | Positive | 494014 - 495510 | 55180.9 |
| nudix hydrolase | BVU_RS01730 | Not Available | Positive | 495629 - 496129 | 19016.3 |
| gfo/idh/moca family protein | BVU_RS01735 | Not Available | Positive | 496824 - 498239 | 53451.8 |
| beta-class carbonic anhydrase | BVU_RS01740 | Not Available | Negative | 498363 - 498902 | 19937.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

