Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | BVU_RS18845 | Not Available | Negative | 4646769 - 4648271 | 57284.9 |
| helix-turn-helix transcriptional regulator | BVU_RS18850 | Not Available | Negative | 4648280 - 4648588 | 11743.2 |
| hypothetical protein | BVU_RS18855 | Not Available | Negative | 4648877 - 4650193 | 51210.4 |
| metallophosphoesterase | BVU_RS18860 | Not Available | Negative | 4650202 - 4650972 | 30127.7 |
| metallophosphoesterase | BVU_RS18865 | Not Available | Negative | 4650977 - 4651561 | 22571.9 |
| duf3791 domain-containing protein | BVU_RS18875 | Not Available | Negative | 4652068 - 4652496 | 15749.2 |
| transposase | BVU_RS18880 | Not Available | Negative | 4653269 - 4654627 | 52858.8 |
| dde-type integrase/transposase/recombinase | BVU_RS18885 | Not Available | Positive | 4654863 - 4655705 | 32257.9 |
| mu transposase domain-containing protein | BVU_RS22925 | Not Available | Positive | 4655681 - 4656073 | 15177.4 |
| trmh family rna methyltransferase | BVU_RS18895 | Not Available | Negative | 4656096 - 4656902 | 29062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

