Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | BVU_RS18695 | Not Available | Negative | 4605277 - 4605768 | 18890.2 |
| helix-turn-helix domain-containing protein | BVU_RS18705 | Not Available | Positive | 4606166 - 4606477 | 12302.7 |
| helix-turn-helix domain-containing protein | BVU_RS18710 | Not Available | Positive | 4606560 - 4606868 | 12202.9 |
| hypothetical protein | BVU_RS18715 | Not Available | Negative | 4607097 - 4607459 | 13782.9 |
| site-specific integrase | BVU_RS18720 | Not Available | Negative | 4607456 - 4608679 | 46453.9 |
| site-specific integrase | BVU_RS18725 | Not Available | Negative | 4608711 - 4609949 | 47535.2 |
| helix-turn-helix transcriptional regulator | BVU_RS21940 | Not Available | Positive | 4610240 - 4610404 | 6138.44 |
| mobilization protein | BVU_RS18730 | Not Available | Positive | 4610866 - 4611489 | 23854.1 |
| helix-turn-helix domain-containing protein | BVU_RS18735 | Not Available | Positive | 4611581 - 4611955 | 14583.1 |
| helix-turn-helix transcriptional regulator | BVU_RS18740 | Not Available | Positive | 4611940 - 4613164 | 46073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

