Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | BVU_RS18170 | Not Available | Negative | 4488460 - 4489110 | 24606.5 |
| duf5063 domain-containing protein | BVU_RS18175 | Not Available | Negative | 4489107 - 4489670 | 21633.7 |
| ftsk/spoiiie family dna translocase | BVU_RS18180 | Not Available | Positive | 4489775 - 4492240 | 91840.0 |
| lola-like putative outer membrane lipoprotein chaperone | BVU_RS18185 | Not Available | Positive | 4492257 - 4492871 | 22975.4 |
| thioredoxin-disulfide reductase | BVU_RS18190 | Not Available | Positive | 4492941 - 4493888 | 34005.6 |
| m16 family metallopeptidase | BVU_RS18195 | Not Available | Positive | 4493919 - 4496738 | 106190.0 |
| duf5687 family protein | BVU_RS18200 | Not Available | Positive | 4496748 - 4498235 | 57446.9 |
| abc transporter atp-binding protein | BVU_RS18205 | Not Available | Positive | 4498248 - 4498955 | 26402.7 |
| c40 family peptidase | BVU_RS18210 | Not Available | Positive | 4498952 - 4499464 | 19489.6 |
| had-ia family hydrolase | BVU_RS21905 | Not Available | Positive | 4499520 - 4501589 | 79785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

