Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | BVU_RS18015 | Not Available | Positive | 4451315 - 4452622 | 48283.4 |
| m24 family metallopeptidase | BVU_RS18020 | Not Available | Negative | 4452779 - 4453939 | 42418.8 |
| hypothetical protein | BVU_RS18025 | Not Available | Positive | 4454173 - 4454478 | 11453.8 |
| efflux rnd transporter periplasmic adaptor subunit | BVU_RS18030 | Not Available | Positive | 4454601 - 4455752 | 43842.2 |
| efflux rnd transporter permease subunit | BVU_RS18035 | Not Available | Positive | 4455765 - 4458914 | 115634.0 |
| efflux transporter outer membrane subunit | BVU_RS18040 | Not Available | Positive | 4458892 - 4460349 | 54862.0 |
| glsb/yeaq/ymge family stress response membrane protein | BVU_RS18045 | Not Available | Negative | 4460438 - 4460689 | 8688.23 |
| efflux rnd transporter periplasmic adaptor subunit | BVU_RS18050 | Not Available | Positive | 4460908 - 4461954 | 38647.1 |
| helix-turn-helix transcriptional regulator | BVU_RS18055 | Not Available | Positive | 4461975 - 4465032 | 112859.0 |
| tolc family protein | BVU_RS18060 | Not Available | Positive | 4465019 - 4466308 | 48622.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

