Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mgh1-like glycoside hydrolase domain-containing protein | BVU_RS01540 | Not Available | Negative | 443712 - 445781 | 78010.4 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS01545 | Not Available | Negative | 445813 - 447348 | 58932.3 |
| tonb-dependent receptor | BVU_RS01550 | Not Available | Negative | 447369 - 450785 | 126398.0 |
| fecr family protein | BVU_RS01555 | Not Available | Negative | 450930 - 451916 | 38650.5 |
| rna polymerase sigma-70 factor | BVU_RS01560 | Not Available | Negative | 452045 - 452626 | 22694.6 |
| abc-f family atp-binding cassette domain-containing protein | BVU_RS01565 | Not Available | Negative | 452666 - 454300 | 61961.7 |
| putative transporter | BVU_RS01570 | Not Available | Negative | 454416 - 456086 | 60144.9 |
| methylmalonyl-coa mutase small subunit | BVU_RS01575 | Not Available | Positive | 456372 - 458282 | 70522.5 |
| methylmalonyl-coa mutase | BVU_RS01580 | Not Available | Positive | 458292 - 460442 | 79111.7 |
| helix-turn-helix transcriptional regulator | BVU_RS01585 | Not Available | Negative | 460765 - 462256 | 55029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

