Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam/spasm domain-containing protein | BVU_RS01495 | Not Available | Positive | 427598 - 429109 | 58168.3 |
| cysteine peptidase family c39 domain-containing protein | BVU_RS01500 | Not Available | Positive | 429102 - 429647 | 21788.5 |
| outer membrane beta-barrel protein | BVU_RS21175 | Not Available | Negative | 429649 - 430260 | 22717.3 |
| hypothetical protein | BVU_RS22485 | Not Available | Negative | 430659 - 430820 | 6013.06 |
| rna degradosome polyphosphate kinase | BVU_RS01510 | Not Available | Negative | 431050 - 433104 | 80495.5 |
| metallophosphoesterase family protein | BVU_RS01515 | Not Available | Positive | 433162 - 433659 | 18707.5 |
| dtdp-glucose 4,6-dehydratase | BVU_RS01520 | Not Available | Positive | 433708 - 434847 | 43738.0 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS01525 | Not Available | Positive | 435317 - 438409 | 115100.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS01530 | Not Available | Positive | 438422 - 440239 | 68245.8 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BVU_RS01535 | Not Available | Negative | 440426 - 443656 | 122542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

