Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase family protein | BVU_RS16835 | Not Available | Negative | 4184410 - 4184760 | 13836.2 |
| trimeric intracellular cation channel family protein | BVU_RS16840 | Not Available | Negative | 4184999 - 4185613 | 22186.8 |
| udp-n-acetyl glucosamine 2-epimerase | BVU_RS16845 | Not Available | Positive | 4185697 - 4186785 | 40202.9 |
| duf3078 domain-containing protein | BVU_RS16850 | Not Available | Negative | 4186886 - 4188280 | 53456.6 |
| ctp synthase | BVU_RS16855 | Not Available | Positive | 4188490 - 4190088 | 60081.3 |
| membrane protein insertase yidc | BVU_RS16860 | Not Available | Positive | 4190128 - 4191993 | 70945.9 |
| alpha/beta hydrolase family protein | BVU_RS16865 | Not Available | Positive | 4192220 - 4194340 | 79823.9 |
| rlua family pseudouridine synthase | BVU_RS16870 | Not Available | Negative | 4195459 - 4196385 | 35642.1 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | BVU_RS16875 | Not Available | Negative | 4196430 - 4197851 | 54010.2 |
| pyruvate, phosphate dikinase | BVU_RS16880 | Not Available | Positive | 4198050 - 4200770 | 99852.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

