Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | BVU_RS16785 | Not Available | Positive | 4173914 - 4174501 | 21914.5 |
| porin family protein | BVU_RS16790 | Not Available | Positive | 4174511 - 4175230 | 27400.6 |
| serine hydroxymethyltransferase | BVU_RS16795 | Not Available | Positive | 4175477 - 4176757 | 46829.6 |
| mate family efflux transporter | BVU_RS16800 | Not Available | Positive | 4176956 - 4178299 | 49290.3 |
| ompa family protein | BVU_RS16805 | Not Available | Positive | 4178348 - 4179067 | 24484.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | BVU_RS16810 | Not Available | Positive | 4179196 - 4179918 | 27910.3 |
| n-acetylmuramoyl-l-alanine amidase-like domain-containing protein | BVU_RS16815 | Not Available | Negative | 4179890 - 4180741 | 31863.7 |
| biotin/lipoyl-binding protein | BVU_RS16820 | Not Available | Negative | 4180900 - 4182675 | 66738.8 |
| rna polymerase sigma factor | BVU_RS16825 | Not Available | Negative | 4182865 - 4183341 | 18649.4 |
| transposase | BVU_RS16830 | Not Available | Negative | 4183395 - 4184399 | 39032.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

