Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | BVU_RS16630 | Not Available | Positive | 4144073 - 4144747 | 25423.7 |
| dihydroorotate dehydrogenase | BVU_RS16635 | Not Available | Negative | 4145113 - 4146024 | 32305.3 |
| dihydroorotate dehydrogenase electron transfer subunit | BVU_RS16640 | Not Available | Negative | 4146012 - 4146791 | 28483.2 |
| helix-turn-helix domain-containing protein | BVU_RS16645 | Not Available | Negative | 4146885 - 4147337 | 17319.5 |
| dna polymerase iii subunit delta | BVU_RS16650 | Not Available | Negative | 4148460 - 4149476 | 38857.2 |
| amp nucleosidase | BVU_RS16655 | Not Available | Negative | 4149488 - 4150264 | 29142.2 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | BVU_RS16660 | Not Available | Positive | 4150322 - 4150771 | 17607.4 |
| zinc ribbon domain-containing protein | BVU_RS16665 | Not Available | Negative | 4150872 - 4151663 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | BVU_RS16670 | Not Available | Negative | 4151672 - 4152766 | 40621.9 |
| hypothetical protein | BVU_RS16675 | Not Available | Negative | 4152828 - 4153106 | 10839.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

