Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | BVU_RS16290 | Not Available | Positive | 4065495 - 4066091 | 21277.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | BVU_RS16295 | Not Available | Positive | 4066110 - 4067384 | 47059.9 |
| dead/deah box helicase | BVU_RS16300 | Not Available | Positive | 4067481 - 4068794 | 49437.8 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | BVU_RS16305 | Not Available | Positive | 4069049 - 4070119 | 39557.6 |
| nad(p)-dependent oxidoreductase | BVU_RS16310 | Not Available | Positive | 4070227 - 4071147 | 33087.2 |
| duf1015 domain-containing protein | BVU_RS16315 | Not Available | Positive | 4071256 - 4072503 | 47087.9 |
| dmt family transporter | BVU_RS16320 | Not Available | Positive | 4072740 - 4073654 | 32976.2 |
| glycoside hydrolase family 20 protein | BVU_RS16325 | Not Available | Positive | 4073700 - 4076021 | 87124.3 |
| rna recognition motif domain-containing protein | BVU_RS16330 | Not Available | Negative | 4076205 - 4076450 | 9169.97 |
| ferredoxin domain-containing protein | BVU_RS16335 | Not Available | Positive | 4076744 - 4077274 | 19120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

