Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2023 family protein | BVU_RS16200 | Not Available | Positive | 4042679 - 4043023 | 13388.6 |
| hypothetical protein | BVU_RS22570 | Not Available | Positive | 4043166 - 4043336 | 6201.39 |
| thioredoxin family protein | BVU_RS16205 | Not Available | Positive | 4043356 - 4043652 | 11450.8 |
| aspartate--trna ligase | BVU_RS16210 | Not Available | Positive | 4043781 - 4045544 | 66454.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | BVU_RS16215 | Not Available | Positive | 4045719 - 4046246 | 19617.8 |
| duf4251 domain-containing protein | BVU_RS16220 | Not Available | Negative | 4046340 - 4046930 | 21487.3 |
| carbon-nitrogen hydrolase | BVU_RS16225 | Not Available | Negative | 4047045 - 4047932 | 33260.4 |
| agmatine deiminase family protein | BVU_RS16230 | Not Available | Negative | 4047944 - 4048975 | 39588.0 |
| translocation/assembly module tamb domain-containing protein | BVU_RS16235 | Not Available | Negative | 4049024 - 4053484 | 166367.0 |
| hded family acid-resistance protein | BVU_RS16240 | Not Available | Negative | 4053549 - 4054112 | 20938.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

