Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf134 domain-containing protein | BVU_RS16075 | Not Available | Negative | 4013645 - 4014463 | 29970.1 |
| hypothetical protein | BVU_RS16080 | Not Available | Positive | 4014993 - 4015766 | 29971.4 |
| leucine-rich repeat protein | BVU_RS21070 | Not Available | Positive | 4015785 - 4018163 | 88321.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 4018554 - 4018627 | Not Available |
| phage integrase sam-like domain and arm dna-binding domain-containing protein | BVU_RS16090 | Not Available | Positive | 4018780 - 4019556 | 29976.5 |
| is21-like element helper atpase istb | BVU_RS16095 | Not Available | Negative | 4019634 - 4020389 | 28940.3 |
| is21 family transposase | BVU_RS16100 | Not Available | Negative | 4020401 - 4021999 | 61544.2 |
| immunoglobulin-like domain-containing protein | BVU_RS23045 | Not Available | Negative | 4022138 - 4022602 | 17877.3 |
| helix-turn-helix transcriptional regulator | BVU_RS23050 | Not Available | Negative | 4022939 - 4023208 | 10763.4 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS16110 | Not Available | Positive | 4023997 - 4027035 | 112795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

