Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pddexk nuclease domain-containing protein | BVU_RS15560 | Not Available | Negative | 3901270 - 3902373 | 42588.9 |
| gnat family n-acetyltransferase | BVU_RS15565 | Not Available | Negative | 3902520 - 3903320 | 30582.8 |
| helix-turn-helix domain-containing protein | BVU_RS15570 | Not Available | Positive | 3903991 - 3904899 | 35396.4 |
| helix-turn-helix domain-containing protein | BVU_RS15575 | Not Available | Positive | 3904931 - 3905818 | 34126.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BVU_RS15580 | Not Available | Positive | 3906005 - 3907765 | 64596.6 |
| abc transporter substrate-binding protein | BVU_RS15585 | Not Available | Negative | 3907873 - 3909030 | 43493.4 |
| tonb-dependent receptor | BVU_RS15590 | Not Available | Negative | 3909044 - 3911221 | 81222.5 |
| hypothetical protein | BVU_RS15600 | Not Available | Positive | 3911661 - 3912041 | 13813.3 |
| tonb-dependent receptor | BVU_RS15605 | Not Available | Positive | 3912150 - 3914453 | 85935.2 |
| methylenetetrahydrofolate reductase | BVU_RS15610 | Not Available | Positive | 3914750 - 3915703 | 35944.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

