Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp/nbp35 family atp-binding protein | BVU_RS01345 | Not Available | Negative | 395941 - 397041 | 39645.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | BVU_RS01350 | Not Available | Negative | 397052 - 397810 | 29773.6 |
| duf975 family protein | BVU_RS01355 | Not Available | Negative | 397933 - 398559 | 23245.0 |
| branched-chain amino acid aminotransferase | BVU_RS01360 | Not Available | Negative | 398577 - 399596 | 37876.2 |
| exodeoxyribonuclease vii small subunit | BVU_RS01365 | Not Available | Negative | 399777 - 399980 | 7823.46 |
| exodeoxyribonuclease vii large subunit | BVU_RS01370 | Not Available | Negative | 399989 - 401296 | 49535.8 |
| s8 family peptidase | BVU_RS01375 | Not Available | Negative | 401296 - 402669 | 49946.9 |
| mate family efflux transporter | BVU_RS01380 | Not Available | Positive | 402791 - 404161 | 49490.1 |
| aaa family atpase | BVU_RS01385 | Not Available | Positive | 404215 - 404844 | 23564.2 |
| tetratricopeptide repeat protein | BVU_RS01390 | Not Available | Positive | 405074 - 406930 | 72895.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

