Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine exporter lyso family protein | BVU_RS15365 | Not Available | Negative | 3859308 - 3859928 | 22330.3 |
| lyso family transporter | BVU_RS15370 | Not Available | Negative | 3859925 - 3860203 | 10143.0 |
| duf4373 domain-containing protein | BVU_RS15375 | Not Available | Positive | 3860822 - 3861673 | 32780.1 |
| na+/h+ antiporter nhac family protein | BVU_RS15380 | Not Available | Negative | 3861851 - 3863155 | 46607.5 |
| uxaa family hydrolase | BVU_RS15385 | Not Available | Negative | 3863301 - 3864791 | 54216.1 |
| laci family dna-binding transcriptional regulator | BVU_RS15390 | Not Available | Negative | 3864813 - 3865886 | 41145.5 |
| sugar kinase | BVU_RS15395 | Not Available | Positive | 3866130 - 3867152 | 37020.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | BVU_RS15400 | Not Available | Positive | 3867262 - 3867936 | 23919.2 |
| m48 family metallopeptidase | BVU_RS15405 | Not Available | Positive | 3868190 - 3869008 | 29692.7 |
| helix-turn-helix domain-containing protein | BVU_RS15410 | Not Available | Positive | 3869507 - 3870340 | 32094.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

