Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | BVU_RS15315 | Not Available | Positive | 3846149 - 3847162 | 38650.1 |
| excinuclease abc subunit uvrb | BVU_RS15320 | Not Available | Negative | 3847329 - 3849362 | 77685.6 |
| outer membrane protein assembly factor bamd | BVU_RS15325 | Not Available | Positive | 3849528 - 3850364 | 32450.3 |
| dna-directed rna polymerase subunit omega | BVU_RS15330 | Not Available | Positive | 3850381 - 3850716 | 12965.3 |
| duf4293 domain-containing protein | BVU_RS15335 | Not Available | Positive | 3850966 - 3851418 | 16883.5 |
| porin family protein | BVU_RS15340 | Not Available | Negative | 3851502 - 3852185 | 25699.9 |
| lysm peptidoglycan-binding domain-containing protein | BVU_RS15345 | Not Available | Negative | 3852185 - 3853993 | 68558.0 |
| excinuclease abc subunit uvra | BVU_RS15350 | Not Available | Positive | 3854148 - 3856976 | 105925.0 |
| cys-trna(pro) deacylase | BVU_RS15355 | Not Available | Positive | 3856991 - 3857476 | 17804.9 |
| peptide mfs transporter | BVU_RS15360 | Not Available | Positive | 3857583 - 3859244 | 59809.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

