Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | BVU_RS13835 | Not Available | Positive | 3507171 - 3510512 | 123052.0 |
| tonb-dependent receptor | BVU_RS13840 | Not Available | Positive | 3510987 - 3513584 | 95800.9 |
| choice-of-anchor j domain-containing protein | BVU_RS13845 | Not Available | Positive | 3513606 - 3515498 | 69713.6 |
| rpn family recombination-promoting nuclease/putative transposase | BVU_RS13850 | Not Available | Positive | 3515896 - 3516753 | 33170.7 |
| 30s ribosomal protein s16 | BVU_RS13855 | Not Available | Negative | 3516828 - 3517379 | 19788.4 |
| ferritin | BVU_RS13860 | Not Available | Positive | 3517586 - 3518068 | 17905.2 |
| alpha/beta hydrolase | BVU_RS13865 | Not Available | Negative | 3518520 - 3519365 | 30944.9 |
| opt family oligopeptide transporter | BVU_RS13870 | Not Available | Negative | 3519399 - 3521390 | 69984.6 |
| hypothetical protein | BVU_RS13875 | Not Available | Negative | 3521476 - 3522237 | 30047.1 |
| metallophosphoesterase family protein | BVU_RS13880 | Not Available | Negative | 3522203 - 3523009 | 31228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

