Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mgh1-like glycoside hydrolase domain-containing protein | BVU_RS13740 | Not Available | Positive | 3478510 - 3481821 | 126712.0 |
| glycoside hydrolase family 78 protein | BVU_RS13745 | Not Available | Positive | 3481873 - 3484629 | 104335.0 |
| glycoside hydrolase family 28 protein | BVU_RS13750 | Not Available | Positive | 3484687 - 3486027 | 49801.1 |
| hypothetical protein | BVU_RS13755 | Not Available | Positive | 3486036 - 3487376 | 49758.5 |
| hypothetical protein | BVU_RS22385 | Not Available | Positive | 3487510 - 3487683 | 6509.75 |
| atp-binding protein | BVU_RS13760 | Not Available | Negative | 3487839 - 3490976 | 119632.0 |
| arac family transcriptional regulator | BVU_RS13765 | Not Available | Positive | 3491314 - 3492150 | 32613.4 |
| duf417 family protein | BVU_RS13770 | Not Available | Positive | 3492243 - 3492833 | 21267.4 |
| do family serine endopeptidase | BVU_RS13775 | Not Available | Positive | 3493155 - 3494678 | 53839.6 |
| rna polymerase sigma factor rpod/siga | BVU_RS13780 | Not Available | Positive | 3494918 - 3495778 | 32805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

