Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS13535 | Not Available | Positive | 3421256 - 3422701 | 54470.2 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS13540 | Not Available | Positive | 3422913 - 3425987 | 113229.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS13545 | Not Available | Positive | 3426013 - 3427512 | 55427.2 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BVU_RS13550 | Not Available | Positive | 3427642 - 3430812 | 121131.0 |
| glycoside hydrolase family 2 protein | BVU_RS13555 | Not Available | Positive | 3430903 - 3433743 | 106186.0 |
| glycosyl hydrolase | BVU_RS13560 | Not Available | Positive | 3433891 - 3437121 | 121484.0 |
| sialate o-acetylesterase | BVU_RS13565 | Not Available | Positive | 3437139 - 3438563 | 53436.1 |
| duf5703 domain-containing protein | BVU_RS13570 | Not Available | Positive | 3438576 - 3440807 | 85678.8 |
| linear amide c-n hydrolase | BVU_RS13575 | Not Available | Positive | 3441021 - 3442100 | 39671.6 |
| Trna-lys | Not Available | Not Available | Positive | 3442271 - 3442343 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

