Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | BVU_RS13490 | Not Available | Negative | 3404375 - 3404947 | 21581.9 |
| duf3868 domain-containing protein | BVU_RS13495 | Not Available | Negative | 3404951 - 3406045 | 40243.1 |
| duf3575 domain-containing protein | BVU_RS13500 | Not Available | Negative | 3406074 - 3406640 | 21274.4 |
| tyrosine-type recombinase/integrase | BVU_RS13505 | Not Available | Negative | 3406987 - 3407916 | 35843.5 |
| glycoside hydrolase family 20 zincin-like fold domain-containing protein | BVU_RS13510 | Not Available | Positive | 3408121 - 3410817 | 101385.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | BVU_RS13515 | Not Available | Negative | 3410823 - 3411437 | 23675.6 |
| duf6922 domain-containing protein | BVU_RS22810 | Not Available | Negative | 3411392 - 3411706 | 12303.0 |
| malectin domain-containing carbohydrate-binding protein | BVU_RS13520 | Not Available | Positive | 3411878 - 3416158 | 162478.0 |
| aspartate:alanine exchanger family transporter | BVU_RS13525 | Not Available | Positive | 3416249 - 3417847 | 56704.7 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS13530 | Not Available | Positive | 3418115 - 3421234 | 115347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

