Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 105 protein | BVU_RS13295 | Not Available | Positive | 3354840 - 3356039 | 45331.0 |
| glycoside hydrolase family 140 protein | BVU_RS13300 | Not Available | Positive | 3356190 - 3357659 | 56339.4 |
| family 78 glycoside hydrolase catalytic domain | BVU_RS13305 | Not Available | Positive | 3357665 - 3361639 | 149839.0 |
| glycoside hydrolase family 127 protein | BVU_RS13310 | Not Available | Positive | 3361864 - 3363969 | 78759.8 |
| right-handed parallel beta-helix repeat-containing protein | BVU_RS13315 | Not Available | Positive | 3363994 - 3365817 | 68576.0 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | BVU_RS13320 | Not Available | Positive | 3365832 - 3367976 | 82010.7 |
| bt0820 family had-type phosphatase | BVU_RS13325 | Not Available | Negative | 3368139 - 3368567 | 16939.3 |
| mannose-1-phosphate guanylyltransferase | BVU_RS13330 | Not Available | Negative | 3368571 - 3369614 | 39471.5 |
| gdp-l-fucose synthase family protein | BVU_RS13335 | Not Available | Negative | 3369629 - 3370711 | 41109.3 |
| gdp-mannose 4,6-dehydratase | BVU_RS13340 | Not Available | Negative | 3370732 - 3371811 | 40983.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

