Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | BVU_RS13200 | Not Available | Negative | 3332365 - 3333723 | 52919.8 |
| 5-formyltetrahydrofolate cyclo-ligase | BVU_RS13205 | Not Available | Negative | 3333868 - 3334347 | 18409.0 |
| s41 family peptidase | BVU_RS13210 | Not Available | Negative | 3334322 - 3336070 | 64897.7 |
| deoxycytidylate deaminase | BVU_RS13215 | Not Available | Negative | 3336085 - 3336519 | 16211.4 |
| duf4847 family protein | BVU_RS13220 | Not Available | Negative | 3336524 - 3337018 | 18544.7 |
| m3 family metallopeptidase | BVU_RS13225 | Not Available | Negative | 3337032 - 3339074 | 77751.2 |
| crp/fnr family transcriptional regulator | BVU_RS13230 | Not Available | Negative | 3339232 - 3339909 | 26004.6 |
| marc family protein | BVU_RS13235 | Not Available | Positive | 3340098 - 3340700 | 22140.0 |
| fad:protein fmn transferase | BVU_RS13240 | Not Available | Negative | 3340859 - 3341875 | 37820.5 |
| manganese efflux pump mntp family protein | BVU_RS13245 | Not Available | Negative | 3341889 - 3342461 | 21298.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

