Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | BVU_RS12995 | Not Available | Negative | 3294841 - 3295770 | 35255.8 |
| cold-shock protein | BVU_RS13000 | Not Available | Negative | 3295841 - 3296287 | 17045.4 |
| 30s ribosomal protein s1 | BVU_RS13005 | Not Available | Negative | 3296537 - 3298333 | 67091.1 |
| simpl domain-containing protein | BVU_RS13015 | Not Available | Negative | 3298860 - 3299561 | 26268.6 |
| n-acetylmuramic acid 6-phosphate etherase | BVU_RS13020 | Not Available | Negative | 3299565 - 3300401 | 30376.9 |
| atpase | BVU_RS13025 | Not Available | Negative | 3300398 - 3301237 | 30757.1 |
| lytr/algr family response regulator transcription factor | BVU_RS13030 | Not Available | Negative | 3301393 - 3302178 | 30198.5 |
| sensor histidine kinase | BVU_RS13035 | Not Available | Negative | 3302171 - 3303214 | 40167.1 |
| outer membrane beta-barrel protein | BVU_RS13040 | Not Available | Negative | 3303331 - 3303969 | 24647.5 |
| duf4136 domain-containing protein | BVU_RS13045 | Not Available | Negative | 3303982 - 3304614 | 24210.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

