Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | BVU_RS01090 | Not Available | Negative | 330003 - 330386 | 15479.7 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS01095 | Not Available | Negative | 330409 - 332097 | 64006.0 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS01100 | Not Available | Negative | 332123 - 335194 | 113422.0 |
| alpha-l-fucosidase | BVU_RS01105 | Not Available | Negative | 335285 - 336931 | 62680.8 |
| helix-turn-helix domain-containing protein | BVU_RS01110 | Not Available | Positive | 337173 - 338033 | 33567.5 |
| aldo/keto reductase | BVU_RS01115 | Not Available | Positive | 338151 - 339083 | 34858.4 |
| l-galacto-1,5-lactonase lgab | BVU_RS01120 | Not Available | Positive | 339101 - 340024 | 35522.1 |
| l-fucose:h+ symporter permease | BVU_RS01125 | Not Available | Positive | 340051 - 341310 | 47261.1 |
| zinc-binding alcohol dehydrogenase family protein | BVU_RS01130 | Not Available | Positive | 341333 - 342352 | 36707.0 |
| marc family protein | BVU_RS01135 | Not Available | Negative | 342425 - 343069 | 23868.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

