Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase family protein | BVU_RS12795 | Not Available | Negative | 3243855 - 3244595 | 27732.7 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | BVU_RS12800 | Not Available | Negative | 3244614 - 3245351 | 27936.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BVU_RS12805 | Not Available | Negative | 3245444 - 3246388 | 35902.1 |
| phoh family protein | BVU_RS12810 | Not Available | Negative | 3246409 - 3247413 | 37699.4 |
| duf5715 family protein | BVU_RS12815 | Not Available | Positive | 3247571 - 3248245 | 24792.2 |
| trna pseudouridine(38-40) synthase trua | BVU_RS12820 | Not Available | Positive | 3248280 - 3249053 | 29793.4 |
| tigr03915 family putative dna repair protein | BVU_RS12825 | Not Available | Negative | 3249019 - 3249786 | 30614.9 |
| putative dna modification/repair radical sam protein | BVU_RS12830 | Not Available | Negative | 3249783 - 3251051 | 48564.8 |
| tlpa family protein disulfide reductase | BVU_RS12835 | Not Available | Positive | 3251429 - 3252748 | 50245.6 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS12840 | Not Available | Positive | 3252856 - 3256059 | 120255.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

