Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-activated cytolysin family protein | BVU_RS12390 | Not Available | Positive | 3161159 - 3162265 | 42003.4 |
| thiol-activated cytolysin family protein | BVU_RS12395 | Not Available | Positive | 3162275 - 3163822 | 58813.5 |
| porin family protein | BVU_RS12400 | Not Available | Positive | 3163864 - 3164409 | 20433.0 |
| mobv family relaxase | BVU_RS12405 | Not Available | Negative | 3164542 - 3165882 | 51704.1 |
| toprim domain-containing protein | BVU_RS12410 | Not Available | Negative | 3166066 - 3167034 | 37306.1 |
| aaa family atpase | BVU_RS12415 | Not Available | Negative | 3167362 - 3168435 | 40793.0 |
| duf3853 family protein | BVU_RS12420 | Not Available | Negative | 3168448 - 3168756 | 11350.9 |
| hypothetical protein | BVU_RS12425 | Not Available | Negative | 3168979 - 3169995 | 40332.9 |
| site-specific integrase | BVU_RS12430 | Not Available | Negative | 3170009 - 3171301 | 50260.1 |
| site-specific integrase | BVU_RS12435 | Not Available | Positive | 3171749 - 3172987 | 47375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

