Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BVU_RS22795 | Not Available | Negative | 3121669 - 3122329 | 24341.9 |
| susd family outer membrane lipoprotein nanu | BVU_RS12240 | Not Available | Negative | 3122533 - 3124107 | 59978.8 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS12245 | Not Available | Negative | 3124137 - 3127409 | 120748.0 |
| alpha-l-fucosidase | BVU_RS12250 | Not Available | Negative | 3127458 - 3128942 | 57625.4 |
| Trna-glu | Not Available | Not Available | Positive | 3129407 - 3129481 | Not Available |
| dcap family trimeric outer membrane transporter | BVU_RS12260 | Not Available | Positive | 3129624 - 3130913 | 48167.6 |
| deoxyribonuclease iv | BVU_RS12265 | Not Available | Positive | 3130956 - 3131792 | 31401.4 |
| hypothetical protein | BVU_RS12275 | Not Available | Negative | 3132271 - 3134343 | 78385.2 |
| trpb-like pyridoxal phosphate-dependent enzyme | BVU_RS12280 | Not Available | Negative | 3134961 - 3136325 | 50196.2 |
| trkh family potassium uptake protein | BVU_RS12285 | Not Available | Positive | 3136520 - 3138349 | 67972.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

