Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | BVU_RS12190 | Not Available | Negative | 3106363 - 3106770 | 14546.4 |
| mate family efflux transporter | BVU_RS12195 | Not Available | Negative | 3106862 - 3108211 | 49603.2 |
| fad-dependent oxidoreductase | BVU_RS12200 | Not Available | Positive | 3108448 - 3110949 | 90809.9 |
| marr family winged helix-turn-helix transcriptional regulator | BVU_RS12205 | Not Available | Positive | 3110983 - 3111312 | 12226.9 |
| clc family h(+)/cl(-) exchange transporter | BVU_RS12210 | Not Available | Positive | 3111345 - 3112943 | 59620.1 |
| epoxyqueuosine reductase queh | BVU_RS12215 | Not Available | Positive | 3112953 - 3113543 | 22791.2 |
| helix-turn-helix domain-containing protein | BVU_RS12220 | Not Available | Positive | 3113540 - 3115357 | 70705.6 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS12225 | Not Available | Positive | 3115549 - 3118800 | 121766.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS12230 | Not Available | Positive | 3118812 - 3120233 | 53335.2 |
| tlpa disulfide reductase family protein | BVU_RS12235 | Not Available | Positive | 3120252 - 3121433 | 43766.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

