Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bt4734/bf3469 family protein | BVU_RS12140 | Not Available | Negative | 3095437 - 3096006 | 21603.9 |
| hypothetical protein | BVU_RS12145 | Not Available | Positive | 3096192 - 3096659 | 16988.2 |
| dead/deah box helicase | BVU_RS12150 | Not Available | Positive | 3096715 - 3098994 | 86482.3 |
| duf4250 domain-containing protein | BVU_RS12155 | Not Available | Positive | 3099109 - 3099285 | 6921.42 |
| helix-turn-helix domain-containing protein | BVU_RS12160 | Not Available | Negative | 3099348 - 3100232 | 34283.2 |
| amp-binding protein | BVU_RS12165 | Not Available | Negative | 3100488 - 3101573 | 40588.3 |
| o-succinylbenzoate synthase | BVU_RS12170 | Not Available | Negative | 3101570 - 3102625 | 39848.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | BVU_RS12175 | Not Available | Negative | 3102703 - 3103524 | 30387.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | BVU_RS12180 | Not Available | Negative | 3103524 - 3105197 | 62975.0 |
| isochorismate synthase | BVU_RS12185 | Not Available | Negative | 3105224 - 3106366 | 43213.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

