Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylating nicotinate-nucleotide diphosphorylase | BVU_RS11950 | Not Available | Positive | 3053131 - 3053982 | 31272.2 |
| duf4923 family protein | BVU_RS11955 | Not Available | Positive | 3054382 - 3054978 | 21522.2 |
| recombinase reca | BVU_RS11960 | Not Available | Negative | 3055173 - 3056216 | 37350.7 |
| thioredoxin-dependent thiol peroxidase | BVU_RS11965 | Not Available | Negative | 3056229 - 3056675 | 16910.4 |
| saccharopine dehydrogenase family protein | BVU_RS11970 | Not Available | Negative | 3056743 - 3057936 | 44966.5 |
| hypothetical protein | BVU_RS11975 | Not Available | Negative | 3058020 - 3059273 | 47788.1 |
| meta domain-containing protein | BVU_RS11980 | Not Available | Positive | 3059398 - 3060189 | 28686.0 |
| molecular chaperone dnak | BVU_RS11985 | Not Available | Positive | 3060518 - 3062434 | 68358.2 |
| haloacid dehalogenase-like hydrolase | BVU_RS11990 | Not Available | Positive | 3062534 - 3063640 | 42659.9 |
| helix-turn-helix transcriptional regulator | BVU_RS11995 | Not Available | Negative | 3063800 - 3064517 | 26208.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

