Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) synthase | BVU_RS11900 | Not Available | Negative | 3044831 - 3046756 | 71124.6 |
| fur family transcriptional regulator | BVU_RS11905 | Not Available | Positive | 3046921 - 3047331 | 15560.8 |
| nadh peroxidase | BVU_RS11910 | Not Available | Positive | 3047409 - 3047960 | 20566.4 |
| thioredoxin | BVU_RS11915 | Not Available | Negative | 3048064 - 3048522 | 16958.8 |
| thioredoxin | BVU_RS11920 | Not Available | Negative | 3048526 - 3048822 | 11303.9 |
| omph family outer membrane protein | BVU_RS11925 | Not Available | Negative | 3048941 - 3049555 | 23085.3 |
| hypothetical protein | BVU_RS11930 | Not Available | Negative | 3049578 - 3049805 | 8190.17 |
| aminoacyl-histidine dipeptidase | BVU_RS11935 | Not Available | Positive | 3050027 - 3051484 | 53122.6 |
| endonuclease | BVU_RS11940 | Not Available | Positive | 3051490 - 3052500 | 38237.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BVU_RS11945 | Not Available | Negative | 3052577 - 3053050 | 18355.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

