Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase b | BVU_RS11655 | Not Available | Negative | 2990688 - 2991122 | 15944.1 |
| transketolase family protein | BVU_RS11660 | Not Available | Negative | 2991119 - 2993131 | 72467.5 |
| xylulokinase | BVU_RS11665 | Not Available | Negative | 2993266 - 2994864 | 57760.0 |
| l-arabinose isomerase | BVU_RS11670 | Not Available | Negative | 2994967 - 2996496 | 57218.3 |
| l-ribulose-5-phosphate 4-epimerase | BVU_RS11675 | Not Available | Negative | 2996536 - 2997222 | 25021.8 |
| nudix hydrolase | BVU_RS11680 | Not Available | Negative | 2997293 - 2997970 | 26233.5 |
| sodium:solute symporter | BVU_RS11685 | Not Available | Negative | 2998046 - 2999788 | 64455.8 |
| aldose epimerase family protein | BVU_RS11690 | Not Available | Negative | 2999815 - 3000969 | 41981.6 |
| galactokinase | BVU_RS11695 | Not Available | Negative | 3001166 - 3002320 | 42994.0 |
| mfs transporter | BVU_RS11700 | Not Available | Negative | 3002361 - 3003701 | 47498.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

